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SRX2163835: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Bareilly by Illumina NextSeq 500
1 ILLUMINA (NextSeq 500) run: 983,399 spots, 290.7M bases, 113.9Mb downloads

External Id: EXT00215277
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: Foodborne Pathgen Survey
PRJNA162823 • SRP023121 • All experiments • All runs
show Abstracthide Abstract
Genome sequencing project
Sample: Clinical or host-associated pathogen sample from Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000954
SAMN01942244 • SRS312239 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000954
Library:
Name: Salmonella enterica subsp. enterica serovar Bareilly Nextera XT shotgun
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Bareilly.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.8.5
demultiplexer10Bcl2fastq2.1
Runs: 1 run, 983,399 spots, 290.7M bases, 113.9Mb
Run# of Spots# of BasesSizePublished
SRR4243003983,399290.7M113.9Mb2016-09-14

ID:
3158761

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